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Molecular mapping of two semidwarf genes in an indica rice variety Aitaiyin3 (Oryza sativa L.)
Zhao Xiangqiang, Liang Guohua, Zhou Jingsong, Yan Changjie, Cao Xiaoying, Gu Minghong
Front. Biol.. 2006, 1 (2): 93-98.
https://doi.org/10.1007/s11515-006-0012-0
Genetic analysis established that Aitaiyin3, a dwarf rice variety derived from a semidwarf cultivar Taiyin1, carries two recessive semidwarf genes. By using simple sequence repeat (SSR) markers, we mapped the two semidwarf genes, sd-1 and sd-t2 on chromosomes 1 and 4, respectively. Sd-t2 was thus named because the semidrawf gene sd-t has already been identified from Aitaiyin 2 whose origin could be traced back to Taiyin1. The result of the molecular mapping of sd-1 gene revealed it is linked to four SSR markers found on chromosome 1. These markers are: RM297, RM302, RM212, and OSR3 spaced at 4.7 cM, 0 cM, 0.8cM and 0 cM, respectively. Sd-t2 was found to be located on chromosome 4 using five SSR markers: two markers, SSR332 and RM1305 located proximal to sd-t2 are spaced 11.6 cM, 3.8 cM, respectively, while the three distally located primers, RM5633, RM307, and RM401 are separated by distances of 0.4 cM, 0.0 cM, and 0.4 cM, respectively.
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An improved yeast two-hybrid approach for detection of interacting proteins
Wan Bingbing, Shi Yan, Huo Keke
Front. Biol.. 2006, 1 (2): 120-126.
https://doi.org/10.1007/s11515-006-0008-9
Yeast two-hybrid approach is popularly used nowadays as an important technical method in the field of studying protein-protein interactions. Although yeast two-hybrid system is obviously advantageous in searching interacting proteins and setting up the network of proteins interaction, not all of proteins can use routine yeast two-hybrid method to search interacting proteins. Many important proteins, such as some nucleoprotein transcriptional factor, carry out the regular method and construct the bait-BD vector to screen the library containing AD vector. However, it usually results in failures because it contains the activate domain and can self-activate the reporter gene. In this study, we changed the research strategy, fused the bait gene (FOXA3) with the AD vector to screen the library containing BD vector, so that we constructed a two-hybrid library containing BD vector and can bypass the interference of self-activation. And we used this two-hybrid library to screen FOXA3, a hepatocyte nuclear factor, and found out an interacting protein: complement component C3.
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Effects of malondialdehyde on growth and proliferation of human bone marrow mesenchymal stem cells in vitro
Li Guolin, Li Hui, Wang Baohe, Yin Dazhong
Front. Biol.. 2006, 1 (2): 131-136.
https://doi.org/10.1007/s11515-006-0021-z
Malondialdehyde (MDA) is a well known inducer of carbonyl stress in a variety of human cells, however, its effects on human bone marrow mesenchymal stem cells (hMSCs) have not been documented. In this study, the effects of MDA concentration on the growth rate and proliferation of hMSCs in vitro were assessed. Under high concentrations of MDA, the cell count was decreased and the population doubling time (PDT) was lengthened. Flow cytometry (FCM) demonstrated that MDA triggered cells to undergo apoptosis, in parallel with the findings in MTT [3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide] assay which showed that it can also impair cellular viability. Surprisingly, FCM also determined that the percentage of hMSCs in G2/M- and S- phases also increased in a dose-dependent manner with respect to MDA concentration. These results strongly suggest that even though hMSCs were severely impaired by high concentrations of MDA, they were still able to send signals that resulted in accelerated cellular proliferation process. This study provided important insights on how carbonyl stress affects cell cycle and proliferation of hMSCs.
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Soil animal communities at five succession stages in the litter of the evergreen broad-leaved forest in Tiantong, China
Yi Lan, You Wenhui, Song Yongchang
Front. Biol.. 2006, 1 (2): 142-150.
https://doi.org/10.1007/s11515-006-0009-8
Soil animals are abundant in forest litter layer, but little attention has been paid to the vertical distribution of community structure of soil animals in the layers at different plant community succession stages. The forest litter layer can be divided into fresh litter layer (L), fermentation layer (F) and humus layer (H), which may represent different litter decomposition stages. The aim of the study is to ascertain the vertical distribution features of soil animal communities among the three litter layers and the change in the succession process of the Evergreen Broad-Leaved Forest (EBLF) in Tiantong, Zhejiang Province, China. Soil animal communities in the five plant communities at different succession stages were investigated during the 2003 winter. Soil animals, which were collected by using Tullgren funnels, amounted to a total of 13 381 individuals falling into 2 phyla, 8 classes and 20 orders. The dominant groups were Acarina and Collembola, accounting for 94.24% of the total individuals, with the number of Acarina individuals 7.66 times than that of Collembola. The common group was Diptera. The results indicated that there was a distinctive vertical distribution of the soil animal communities in the forest litter layer, but it differed from that in soil below the litter layer. In contrast to those in the soil, the soil animals in the litter layer generally tended to increase in both group abundance and density from the top fresh litter layer to the bottom humus layer. Altogether 19 groups and 59.03% of total individuals were found in the bottom layer, while only 8 groups and 5.35% of the total individuals in the top. Moreover, there were some variations in the distribution of the soil animals at different plant succession stages. 85.19% of Homoptera and 100% of Symphyla were found in the litter layer at the climax succession stage, while 75.61% of Thysanoptera at the intermediate succession stage. Therefore, these groups might be seen as indicative groups. The total numbers of soil animal groups and individuals in the litter layers greatly changed in the succession process of the EBLF. They both were greatest at the climax, moderate at the intermediate and smallest at the primary succession stage. However, the main soil animal groups in the litter at the different succession stages were essentially the same. They were Acarina, Collembola, Diptera and Lepidoptera. Although similarity analysis revealed that the soil animal communities in the litter at the intermediate succession stage were most similar to those at the climax succession stage, they differed greatly from each other in the Shannon-Wiener diversity index. The Shannon-Wiener index was highest at the climax succession stage and lowest at the intermediate succession stage. Finally, the paper discusses the following three questions: the role of soil animals as indicators for plant community succession; the role of different soil animal groups in the litter decomposition at different stages; and the major factors affecting the composition and distribution of soil animals in the litter. This paper provides a new perspective for the research on the succession mechanism of plant communities and the decomposition functions of soil animals.
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Study on the Bryoflora in Yunmeng Mountain, south Hebei Province, China
Tang Weibin, Zhao Jiancheng
Front. Biol.. 2006, 1 (2): 158-162.
https://doi.org/10.1007/s11515-006-0007-x
Mountain Yunmeng (37?20 2N?113?54 2E ) is 1 520m above sea level and part of the Taihang Mountains. With a temperate continental monsoon climate, the mountain area belongs to the warm temperate deciduous broad-leaved forest region. This thesis was mostly based on the study of more than 2 000 packages of bryophytes which were mainly collected by the authors in Mt.Yunmeng, Hebei Province. Of these specimens, there are 36 families, 99 genera, and 244 species (including 17 varieties, 5 formes, and 1 subspecies) which have been studied and identified. Moreover, it could be seen that Mt.Yunmeng has a diverse population of bryophytes. The bryoflora could be divided into 10 geographical elements: north temperate element make up the majority, accounting for 52.11% of the entire known bryoflora, and another belongs to the East Asian element, accounting for 19.25%. All temperate elements, not including 14 endemic to China and 31 Cosmopolitans, were added up to 188 species, which took 88.3% of all the entire known bryoflora in Mt.Yunmeng. However, there were only 11 Subtropical and Tropical elements. To all appearances, the bryoflora of Mt.Yunmeng showed obvious temperate characteristics. The authors conclude that the bryoflora in Mt.Yunmeng belongs to the middle type, between the warm and dry northern mountain area and the warm and damp southern mountain area. The microclimatic environment greatly influences the bryoflora.
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Photosynthetic pigments and photosynthetic products of endophyte -infected and endophyte -free Lolium perenne L. under drought stress conditions
Ren Anzhi, Gao Yubao, Wang Wei, Wang Jinlong
Front. Biol.. 2006, 1 (2): 168-173.
https://doi.org/10.1007/s11515-006-0025-8
Endophyte-infected (EI) seeds of Lolium perenne L. were used to attain endophyte-free (EF) population by heating the seeds at 43! for 15 min and then 57! for 25 min. Relative water content (RWC), chlorophyll, soluble sugar and starch content of EI and EF populations under normal and drought stress conditions were compared to investigate the effect of endophyte infection on the host plant. Under severe stress, RWC of EI leaf was significantly higher than that of EF leaf, i.e. EI plants took more advantages over EF plants in water-holding ability. Under mild stress, endophyte could enhance soluble sugars in host plants to improve their osmotic ability. With stress intensification, the improvement of endophyte no longer existed, and more photosynthetic products (such as starch) accumulated in EI plants to survive through the undesirable conditions. In the next spring, EI populations will recover more rapidly than EF populations. The biomass of a population is closely related to its photosynthesis. Under severe stress, EI population significantly accumulated more biomass than EF population. As far as photosynthetic pigments were concerned, contents of Chla, Chlb and Car of EI plants were close to those of EF plants, which suggested that endophyte infection didn t alleviate photosynthetic pigments from being destroyed by drought stress, and endophyte might improve photosynthesis ability of its host plant in other ways.
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Home range and habitat use of male Reeves’s Pheasant (Syrmaticus reevesii) during winter in Dongzhai National Nature Reserve, Henan Province, China
Xu Jiliang, Zhang Xiaohui, Zhang Zhengwang, Zheng Guangmei, Ruan Xiangfeng, Zhang Keyin, Xi Bo
Front. Biol.. 2006, 1 (2): 174-181.
https://doi.org/10.1007/s11515-006-0017-8
Home range and habitat use of male Reeves s pheasant (Syrmaticus reevesii) were studied during winter of 2001~2002 and 2002~2003 in the Dongzhai National Nature Reserve, Henan Province. Results from five individuals of Reeves s pheasant with over 30 relocations, indicated that the average size of home range was 10.03 ? 1.17 hm2 by Minimum Convex Polygon method, 8.60 ? 0.35 hm2 by 90% Harmonic Mean Transformation method, and 9.50 ?1.90 hm2 by 95% Fixed Kernel method. It was observed that the winter range is smaller than that in the breeding season. The mean core area of the home range was found to be 1.88 ? 0.37 hm2. Although the habitat composition of the core area varied greatly for individuals, a large part of the habitats used were composed of conifer and broadleaf mixed forests, masson pine forests, fir forests, and shrubs. Habitat use within the study area was non-random, while habitats within home ranges were randomly used. Habitat use was dictated by tree diameter at breast height, shrub height and coverage at 2.0 m. The proximity between forests and shrubs were also found to be important in providing refuge for the birds during winter. Recommendations for conservation management include protecting the existing habitats in Dongzhai National Nature Reserve, increasing suitable habitat for Reeves s Pheasant through artificial plantations (e.g. firs), and restoring some parts of the large shrub area into forests.
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A study on the relationship between vegetation pattern and environment in the upstream of Minjiang River, China
Li Chongwei, Lin Yong, Ge Jianping, Liu Lijuan
Front. Biol.. 2006, 1 (2): 187-194.
https://doi.org/10.1007/s11515-006-0022-y
The vegetation pattern in the upstream of Minjiang River, and its relationship with environment factors, such as landscape position (elevation, slope, aspect), precipitation and temperature and soil are analyzed in this paper. The data used in this paper were based on the landscape map derived from 1994 TM imagery. The results were as follows: 1) dominant landscape types were forest, shrub land and grassland, which were very similar in terms of area ratio (32.87%, 31.85% and 28.44%, respectively); 2) the patch shape of conifer forest and mixed forest was complicated while that of broad-leaved forest and cultivated land was simple; 3) the fragmentation of conifer forest and mixed forest was serious in contrast with low fragmentation of broad-leaved forest and cultivated land; and 4) closed scrub and grassland had a high contagion and good connectivity while mixed forest had a lower contagion and bad connectivity. In addition, the vegetation distribution pattern of upstream of Minjiang River was closely related with elevation and temperature, but the relationship between vegetation and precipitation was not statistically significant.
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