High energy astrophysics is one of the most active branches in the contemporary astrophysics. It studies astrophysical objects that emit X-ray and γ-ray photons, such as accreting super-massive and stellar-size black holes, and various species of neutron stars. With the operations of many space-borne and ground-based observational facilities, high energy astrophysics has enjoyed rapid development in the past decades. It is foreseen that the field will continue to advance rapidly in the coming decade, with possible ground-breaking discoveries of astrophysical sources in the high-energy neutrino and gravitational wave channels. This Special Issue of Frontiers of Physics is dedicated to a systematic survey of the field of high energy astrophysics as it stands in 2013.

This is a general review on the observations and physics of black hole X-ray binaries and microquasars, with the emphasize on recent developments in the high energy regime. The focus is put on understanding the accretion flows and measuring the parameters of black holes in them. It includes mainly two parts: i) Brief review of several recent review article on this subject; ii) Further development on several topics, including black hole spin measurements, hot accretion flows, corona formation, state transitions and thermal stability of standard think disk. This is thus not a regular bottom-up approach, which I feel not necessary at this stage. Major effort is made in making and incorporating from many sources useful plots and illustrations, in order to make this article more comprehensible to non-expert readers. In the end I attempt to make a unification scheme on the accretion-outflow (wind/jet) connections of all types of accreting BHs of all accretion rates and all BH mass scales, and finally provide a brief outlook.

Neutron stars are a very diverse population, both in their observational and their physical properties. They prefer to radiate most of their energy at X-ray and gamma-ray wavelengths. But whether their emission is powered by rotation, accretion, heat, magnetic fields or nuclear reactions, they are all different species of the same animal whose magnetic field evolution and interior composition remain a mystery. This article will broadly review the properties of inhabitants of the neutron star zoo, with emphasis on their high-energy emission.

With the successful realization of the current-generation of ground-based detectors, TeV Astronomy has entered into a new era. We review recent advances in VHE astronomy, focusing on the potential of Imaging Atmospheric Cherenkov Telescopes (IACTs), and highlight astrophysical implications of the results obtained within recent years.

This review focuses on high-energy cosmic rays in the PeV energy range and above. Of particular interest is the knee of the spectrum around 3 PeV and the transition from cosmic rays of Galactic origin to particles from extra-galactic sources. Our goal is to establish a baseline spectrum from 10¹⁴ to 10²⁰ eV by combining the results of many measurements at different energies. In combination with measurements of the nuclear composition of the primaries, the shape of the energy spectrum places constraints on the number and spectra of sources that may contribute to the observed spectrum.