|
|
An overview of inflammation: mechanism and consequences |
Afsar U. AHMED( ) |
Monash University Department of Medicine, Centre for Inflammatory Diseases, Monash Medical Centre, 246, Clayton Road, Clayton, VIC 3168 Australia |
|
|
Abstract Inflammation is an essential response provided by the immune systems that ensures the survival during infection and tissue injury. Inflammatory responses are essential for the maintenance of normal tissue homeostasis. The molecular mechanism of inflammation is quite a complicated process which is initiated by the recognition of specific molecular patterns associated with either infection or tissue injury. The entire process of the inflammatory response is mediated by several key regulators involved in the selective expression of proinflammatory molecules. Prolonged inflammations are often associated with severe detrimental side effects on health. Alterations in inflammatory responses due to persistent inducers or genetic variations are on the rise over the last couple of decades, causing a variety of inflammatory diseases and pathophysiological conditions.
|
Keywords
Inflammation
inflammatory diseases
proinflammatory cytokines
pattern-recognition receptors
transcription factors and chromatin structure
|
Corresponding Author(s):
AHMED Afsar U.,Email:Afsar.Ahmed@monash.edu, afsaruahmed@gmail.com
|
Issue Date: 01 August 2011
|
|
1 |
Aggarwal B B, Vijayalekshmi R V, Sung B (2009). Targeting inflammatory pathways for prevention and therapy of cancer: short-term friend, long-term foe. Clin Cancer Res , 15(2): 425-430 doi: 10.1158/1078-0432.CCR-08-0149 pmid:19147746
|
2 |
Akira S, Uematsu S, Takeuchi O (2006). Pathogen recognition and innate immunity. Cell , 124(4): 783-801 doi: 10.1016/j.cell.2006.02.015 pmid:16497588
|
3 |
Amir-Zilberstein L, Ainbinder E, Toube L, Yamaguchi Y, Handa H, Dikstein R (2007). Differential regulation of NF-kappaB by elongation factors is determined by core promoter type. Mol Cell Biol , 27(14): 5246-5259 doi: 10.1128/MCB.00586-07 pmid:17502349
|
4 |
Barnes P J (2009). Targeting the epigenome in the treatment of asthma and chronic obstructive pulmonary disease. Proc Am Thorac Soc , 6(8): 693-696 doi: 10.1513/pats.200907-071DP pmid:20008877
|
5 |
Bayarsaihan D (2011). Epigenetic mechanisms in inflammation. J Dent Res , 90(1): 9-17 doi: 10.1177/0022034510378683 pmid:21178119
|
6 |
Bohmann D, Bos T J, Admon A, Nishimura T, Vogt P K, Tjian R (1987). Human proto-oncogene c-jun encodes a DNA binding protein with structural and functional properties of transcription factor AP-1. Science , 238(4832): 1386-1392 doi: 2825349" target="_blank">10.1126/science. pmid:2825349 pmid:2825349
|
7 |
Bosisio D, Marazzi I, Agresti A, Shimizu N, Bianchi M E, Natoli G (2006). A hyper-dynamic equilibrium between promoter-bound and nucleoplasmic dimers controls NF-kappaB-dependent gene activity. EMBO J , 25(4): 798-810 doi: 10.1038/sj.emboj.7600977 pmid:16467852
|
8 |
Brownell J E, Zhou J, Ranalli T, Kobayashi R, Edmondson D G, Roth S Y, Allis C D (1996). Tetrahymena histone acetyltransferase A: a homolog to yeast Gcn5p linking histone acetylation to gene activation. Cell , 84(6): 843-851 doi: 10.1016/S0092-8674(00)81063-6 pmid:8601308
|
9 |
Carey M F, Peterson C L, Smale S T 2009. Transcriptional Regulation in Eukaryotes: Concepts, Strategies, and Techniques. New York: Cold Spring Harbor Laboratory Press
|
10 |
Cote J, Quinn J, Workman J L, Peterson C L (1994). Stimulation of GAL4 derivative binding to nucleosomal DNA by the yeast SWI/SNF complex. Science , 265(5168): 53-60 doi: 8016655" target="_blank">10.1126/science. pmid:8016655 pmid:8016655
|
11 |
Dalton S, Treisman R (1992). Characterization of SAP-1, a protein recruited by serum response factor to the c-fos serum response element. Cell , 68(3): 597-612 doi: 10.1016/0092-8674(92)90194-H pmid:1339307
|
12 |
de Martel C, Franceschi S (2009). Infections and cancer: established associations and new hypotheses. Crit Rev Oncol Hematol , 70(3): 183-194 doi: 10.1016/j.critrevonc.2008.07.021 pmid:18805702
|
13 |
De Santa F, Totaro M G, Prosperini E, Notarbartolo S, Testa G, Natoli G (2007). The histone H3 lysine-27 demethylase Jmjd3 links inflammation to inhibition of polycomb-mediated gene silencing. Cell , 130(6): 1083-1094 doi: 10.1016/j.cell.2007.08.019 pmid:17825402
|
14 |
de Visser K E, Eichten A, Coussens L M (2006). Paradoxical roles of the immune system during cancer development. Nat Rev Cancer , 6(1): 24-37 doi: 10.1038/nrc1782 pmid:16397525
|
15 |
Fakhouri F, Frémeaux-Bacchi V, No?l L H, Cook H T, Pickering M C (2010). C3 glomerulopathy: a new classification. Nat Rev Nephrol , 6(8): 494-499 doi: 10.1038/nrneph.2010.85 pmid:20606628
|
16 |
Garrett W S, Gordon J I, Glimcher L H (2010). Homeostasis and inflammation in the intestine. Cell , 140(6): 859-870 doi: 10.1016/j.cell.2010.01.023 pmid:20303876
|
17 |
Ghosh S, May M J, Kopp E B (1998). NF-kappa B and Rel proteins: evolutionarily conserved mediators of immune responses. Annu Rev Immunol , 16(1): 225-260 doi: 10.1146/annurev.immunol.16.1.225 pmid:9597130
|
18 |
Glass C K, Saijo K, Winner B, Marchetto M C, Gage F H (2010). Mechanisms underlying inflammation in neurodegeneration. Cell , 140(6): 918-934 doi: 10.1016/j.cell.2010.02.016 pmid:20303880
|
19 |
Greenberg M E, Ziff E B (1984). Stimulation of 3T3 cells induces transcription of the c-fos proto-oncogene. Nature , 311(5985): 433-438 doi: 10.1038/311433a0 pmid:6090941
|
20 |
Grivennikov S I, Greten F R, Karin M (2010). Immunity, inflammation, and cancer. Cell , 140(6): 883-899 doi: 10.1016/j.cell.2010.01.025 pmid:20303878
|
21 |
Hager G L, McNally J G, Misteli T (2009). Transcription dynamics. Mol Cell , 35(6): 741-753 doi: 10.1016/j.molcel.2009.09.005 pmid:19782025
|
22 |
Hargreaves D C, Horng T, Medzhitov R (2009). Control of inducible gene expression by signal-dependent transcriptional elongation. Cell , 138(1): 129-145 doi: 10.1016/j.cell.2009.05.047 pmid:19596240
|
23 |
Hollingsworth J W, Siegel E R, Creasey W A (1967). Granulocyte survival in synovial exudate of patients with rheumatoid arthritis and other inflammatory joint diseases. Yale J Biol Med , 39(5): 289-296 pmid:6034277
|
24 |
Honda K, Takaoka A, Taniguchi T (2006). Type I interferon [corrected] gene induction by the interferon regulatory factor family of transcription factors. Immunity , 25(3): 349-360 doi: 10.1016/j.immuni.2006.08.009 pmid:16979567
|
25 |
Hotamisligil G S (2006). Inflammation and metabolic disorders. Nature , 444(7121): 860-867 doi: 10.1038/nature05485 pmid:17167474
|
26 |
Imai Y, Kuba K, Neely G G, Yaghubian-Malhami R, Perkmann T, van Loo G, Ermolaeva M, Veldhuizen R, Leung Y H, Wang H, Liu H, Sun Y, Pasparakis M, Kopf M, Mech C, Bavari S, Peiris J S, Slutsky A S, Akira S, Hultqvist M, Holmdahl R, Nicholls J, Jiang C, Binder C J, Penninger J M (2008). Identification of oxidative stress and Toll-like receptor 4 signaling as a key pathway of acute lung injury. Cell , 133(2): 235-249 doi: 10.1016/j.cell.2008.02.043 pmid:18423196
|
27 |
Imbalzano A N, Kwon H, Green M R, Kingston R E (1994). Facilitated binding of TATA-binding protein to nucleosomal DNA. Nature , 370(6489): 481-485 doi: 10.1038/370481a0 pmid:8047170
|
28 |
Koch M A, Tucker-Heard G, Perdue N R, Killebrew J R, Urdahl K B, Campbell D J (2009). The transcription factor T-bet controls regulatory T cell homeostasis and function during type 1 inflammation. Nat Immunol , 10(6): 595-602 doi: 10.1038/ni.1731 pmid:19412181
|
29 |
Kovesdi I, Reichel R, Nevins J R (1986). Identification of a cellular transcription factor involved in E1A trans-activation. Cell , 45(2): 219-228 doi: 10.1016/0092-8674(86)90386-7 pmid:2938741
|
30 |
Kumar V, Carey M, Robbins S L 2003. Robbins Basic Pathology. 7th edition . New York: Saunders
|
31 |
Kwon H, Imbalzano A N, Khavari P A, Kingston R E, Green M R (1994). Nucleosome disruption and enhancement of activator binding by a human SW1/SNF complex. Nature , 370(6489): 477-481 doi: 10.1038/370477a0 pmid:8047169
|
32 |
Lai D, Wan M, Wu J, Preston-Hurlburt P, Kushwaha R, Grundstr?m T, Imbalzano A N, Chi T (2009). Induction of TLR4-target genes entails calcium/calmodulin-dependent regulation of chromatin remodeling. Proc Natl Acad Sci USA , 106(4): 1169-1174 doi: 10.1073/pnas.0811274106 pmid:19164553
|
33 |
Lin W W, Karin M (2007). A cytokine-mediated link between innate immunity, inflammation, and cancer. J Clin Invest , 117(5): 1175-1183 doi: 10.1172/JCI31537 pmid:17476347
|
34 |
Liu G, Friggeri A, Yang Y, Park Y J, Tsuruta Y, Abraham E (2009). miR-147, a microRNA that is induced upon Toll-like receptor stimulation, regulates murine macrophage inflammatory responses. Proc Natl Acad Sci USA , 106(37): 15819-15824 doi: 10.1073/pnas.0901216106 pmid:19721002
|
35 |
Locksley R M (2010). Asthma and allergic inflammation. Cell , 140(6): 777-783 doi: 10.1016/j.cell.2010.03.004 pmid:20303868
|
36 |
Luger K, M?der A W, Richmond R K, Sargent D F, Richmond T J (1997). Crystal structure of the nucleosome core particle at 2.8 A resolution. Nature , 389(6648): 251-260 doi: 10.1038/38444 pmid:9305837
|
37 |
Maeda S, Kamata H, Luo J L, Leffert H, Karin M (2005). IKKbeta couples hepatocyte death to cytokine-driven compensatory proliferation that promotes chemical hepatocarcinogenesis. Cell , 121(7): 977-990 doi: 10.1016/j.cell.2005.04.014 pmid:15989949
|
38 |
Majno G, Joris I 2004. Cells, Tissues, and Diseases. Second Edition . Oxford: Oxford University Press
|
39 |
Mantovani A, Allavena P, Sica A, Balkwill F (2008). Cancer-related inflammation. Nature , 454(7203): 436-444 doi: 10.1038/nature07205 pmid:18650914
|
40 |
Medzhitov R (2007). Recognition of microorganisms and activation of the immune response. Nature , 449(7164): 819-826 doi: 10.1038/nature06246 pmid:17943118
|
41 |
Medzhitov R (2008). Origin and physiological roles of inflammation. Nature , 454(7203): 428-435 doi: 10.1038/nature07201 pmid:18650913
|
42 |
Medzhitov R (2010). Inflammation 2010: new adventures of an old flame. Cell , 140(6): 771-776 doi: 10.1016/j.cell.2010.03.006 pmid:20303867
|
43 |
Montminy M R, Bilezikjian L M (1987). Binding of a nuclear protein to the cyclic-AMP response element of the somatostatin gene. Nature , 328(6126): 175-178 doi: 10.1038/328175a0 pmid:2885756
|
44 |
Munshi N, Agalioti T, Lomvardas S, Merika M, Chen G, Thanos D (2001). Coordination of a transcriptional switch by HMGI(Y) acetylation. Science , 293(5532): 1133-1136 doi: 10.1126/science.293.5532.1133 pmid:11498590
|
45 |
Niwa T, Tsukamoto T, Toyoda T, Mori A, Tanaka H, Maekita T, Ichinose M, Tatematsu M, Ushijima T (2010). Inflammatory processes triggered by Helicobacter pylori infection cause aberrant DNA methylation in gastric epithelial cells. Cancer Res , 70(4): 1430-1440 doi: 10.1158/0008-5472.CAN-09-2755 pmid:20124475
|
46 |
Okazaki I M, Kotani A, Honjo T (2007). Role of AID in tumorigenesis. Adv Immunol , 94: 245-273 doi: 10.1016/S0065-2776(06)94008-5 pmid:17560277
|
47 |
Ouyang W, Kolls J K, Zheng Y (2008). The biological functions of T helper 17 cell effector cytokines in inflammation. Immunity , 28(4): 454-467 doi: 10.1016/j.immuni.2008.03.004 pmid:18400188
|
48 |
Panne D, Maniatis T, Harrison S C (2004). Crystal structure of ATF-2/c-Jun and IRF-3 bound to the interferon-beta enhancer. EMBO J , 23(22): 4384-4393 doi: 10.1038/sj.emboj.7600453 pmid:15510218
|
49 |
Panne D, Maniatis T, Harrison S C (2007). An atomic model of the interferon-beta enhanceosome. Cell , 129(6): 1111-1123 doi: 10.1016/j.cell.2007.05.019 pmid:17574024
|
50 |
Prywes R, Roeder R G (1986). Inducible binding of a factor to the c-fos enhancer. Cell , 47(5): 777-784 doi: 10.1016/0092-8674(86)90520-9 pmid:3096578
|
51 |
Ramirez-Carrozzi V R, Braas D, Bhatt D M, Cheng C S, Hong C, Doty K R, Black J C, Hoffmann A, Carey M, Smale S T (2009). A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling. Cell , 138(1): 114-128 doi: 10.1016/j.cell.2009.04.020 pmid:19596239
|
52 |
Ramirez-Carrozzi V R, Nazarian A A, Li C C, Gore S L, Sridharan R, Imbalzano A N, Smale S T (2006). Selective and antagonistic functions of SWI/SNF and Mi-2beta nucleosome remodeling complexes during an inflammatory response. Genes Dev , 20(3): 282-296 doi: 10.1101/gad.1383206 pmid:16452502
|
53 |
Robinson D S, Hamid Q, Ying S, Tsicopoulos A, Barkans J, Bentley A M, Corrigan C, Durham S R, Kay A B (1992). Predominant TH2-like bronchoalveolar T-lymphocyte population in atopic asthma. N Engl J Med , 326(5): 298-304 doi: 10.1056/NEJM199201303260504 pmid:1530827
|
54 |
Rogers A J, Raby B A, Lasky-Su J A, Murphy A, Lazarus R, Klanderman B J, Sylvia J S, Ziniti J P, Lange C, Celedón J C, Silverman E K, Weiss S T (2009). Assessing the reproducibility of asthma candidate gene associations, using genome-wide data. Am J Respir Crit Care Med , 179(12): 1084-1090 doi: 10.1164/rccm.200812-1860OC pmid:19264973
|
55 |
Rubtsov Y P, Rasmussen J P, Chi E Y, Fontenot J, Castelli L, Ye X, Treuting P, Siewe L, Roers A, Henderson W R Jr, Muller W, Rudensky A Y (2008). Regulatory T cell-derived interleukin-10 limits inflammation at environmental interfaces. Immunity , 28(4): 546-558 doi: 10.1016/j.immuni.2008.02.017 pmid:18387831
|
56 |
Saccani S, Natoli G (2002). Dynamic changes in histone H3 Lys 9 methylation occurring at tightly regulated inducible inflammatory genes. Genes Dev , 16(17): 2219-2224 doi: 10.1101/gad.232502 pmid:12208844
|
57 |
Saccani S, Pantano S, Natoli G (2001). Two waves of nuclear factor kappaB recruitment to target promoters. J Exp Med , 193(12): 1351-1359 doi: 10.1084/jem.193.12.1351 pmid:11413190
|
58 |
Sakurai T, He G, Matsuzawa A, Yu G Y, Maeda S, Hardiman G, Karin M (2008). Hepatocyte necrosis induced by oxidative stress and IL-1 alpha release mediate carcinogen-induced compensatory proliferation and liver tumorigenesis. Cancer Cell , 14(2): 156-165 doi: 10.1016/j.ccr.2008.06.016 pmid:18691550
|
59 |
Sen R, Baltimore D (1986). Inducibility of kappa immunoglobulin enhancer-binding protein Nf-kappa B by a posttranslational mechanism. Cell , 47(6): 921-928 doi: 10.1016/0092-8674(86)90807-X pmid:3096580
|
60 |
Serhan C N, Savill J (2005). Resolution of inflammation: the beginning programs the end. Nat Immunol , 6(12): 1191-1197 doi: 10.1038/ni1276 pmid:16369558
|
61 |
Shaked I, Meerson A, Wolf Y, Avni R, Greenberg D, Gilboa-Geffen A, Soreq H (2009). MicroRNA-132 potentiates cholinergic anti-inflammatory signaling by targeting acetylcholinesterase. Immunity , 31(6): 965-973 doi: 10.1016/j.immuni.2009.09.019 pmid:20005135
|
62 |
Shuto T, Furuta T, Oba M, Xu H, Li J D, Cheung J, Gruenert D C, Uehara A, Suico M A, Okiyoneda T, Kai H (2006). Promoter hypomethylation of Toll-like receptor-2 gene is associated with increased proinflammatory response toward bacterial peptidoglycan in cystic fibrosis bronchial epithelial cells. FASEB J , 20(6): 782-784 pmid:16478769
|
63 |
Smyth M J, Dunn G P, Schreiber R D (2006). Cancer immunosurveillance and immunoediting: the roles of immunity in suppressing tumor development and shaping tumor immunogenicity. Adv Immunol , 90: 1-50 doi: 10.1016/S0065-2776(06)90001-7 pmid:16730260
|
64 |
Takahashi H, Ogata H, Nishigaki R, Broide D H, Karin M (2010). Tobacco smoke promotes lung tumorigenesis by triggering IKKbeta- and JNK1-dependent inflammation. Cancer Cell , 17(1): 89-97 doi: 10.1016/j.ccr.2009.12.008 pmid:20129250
|
65 |
Thanos D, Maniatis T (1995). Virus induction of human IFN beta gene expression requires the assembly of an enhanceosome. Cell , 83(7): 1091-1100 doi: 10.1016/0092-8674(95)90136-1 pmid:8548797
|
66 |
Treisman R (1986). Identification of a protein-binding site that mediates transcriptional response of the c-fos gene to serum factors. Cell , 46(4): 567-574 doi: 10.1016/0092-8674(86)90882-2 pmid:3524858
|
67 |
Uysal H, Bockermann R, Nandakumar K S, Sehnert B, Bajtner E, Engstr?m A, Serre G, Burkhardt H, Thunnissen M M, Holmdahl R (2009). Structure and pathogenicity of antibodies specific for citrullinated collagen type II in experimental arthritis. J Exp Med , 206(2): 449-462 doi: 10.1084/jem.20081862 pmid:19204106
|
68 |
Vallabhapurapu S, Karin M (2009). Regulation and function of NF-kappaB transcription factors in the immune system. Annu Rev Immunol , 27(1): 693-733 doi: 10.1146/annurev.immunol.021908.132641 pmid:19302050
|
69 |
Weinmann A S, Plevy S E, Smale S T (1999). Rapid and selective remodeling of a positioned nucleosome during the induction of IL-12 p40 transcription. Immunity , 11(6): 665-675 doi: 10.1016/S1074-7613(00)80141-7 pmid:10626889
|
70 |
Weintraub H, Groudine M (1976). Chromosomal subunits in active genes have an altered conformation. Science , 193(4256): 848-856 doi: 948749" target="_blank">10.1126/science. pmid:948749 pmid:948749
|
71 |
Worm J, Stenvang J, Petri A, Frederiksen K S, Obad S, Elmén J, Hedtj?rn M, Straarup E M, Hansen J B, Kauppinen S (2009). Silencing of microRNA-155 in mice during acute inflammatory response leads to derepression of c/ebp Beta and down-regulation of G-CSF. Nucleic Acids Res , 37(17): 5784-5792 doi: 10.1093/nar/gkp577 pmid:19596814
|
72 |
Wu C, Bingham P M, Livak K J, Holmgren R, Elgin S C (1979). The chromatin structure of specific genes: I. Evidence for higher order domains of defined DNA sequence. Cell , 16(4): 797-806 455449 doi: 10.1016/0092-8674(79)90095-3
|
73 |
Zhao K, Wang W, Rando O J, Xue Y, Swiderek K, Kuo A, Crabtree G R (1998). Rapid and phosphoinositol-dependent binding of the SWI/SNF-like BAF complex to chromatin after T lymphocyte receptor signaling. Cell , 95(5): 625-636 doi: 10.1016/S0092-8674(00)81633-5 pmid:9845365
|
74 |
Zong W X, Thompson C B (2006). Necrotic death as a cell fate. Genes Dev , 20(1): 1-15 doi: 10.1101/gad.1376506 pmid:16391229
|
|
Viewed |
|
|
|
Full text
|
|
|
|
|
Abstract
|
|
|
|
|
Cited |
|
|
|
|
|
Shared |
|
|
|
|
|
Discussed |
|
|
|
|