Please wait a minute...
Frontiers of Chemical Science and Engineering

ISSN 2095-0179

ISSN 2095-0187(Online)

CN 11-5981/TQ

Postal Subscription Code 80-969

2018 Impact Factor: 2.809

Front. Chem. Sci. Eng.    2022, Vol. 16 Issue (6) : 921-929    https://doi.org/10.1007/s11705-022-2144-4
RESEARCH ARTICLE
Diffusion process in enzyme–metal hybrid catalysts
Shitong Cui1, Jun Ge1,2()
1. Key Lab for Industrial Biocatalysis, Ministry of Education, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
2. Institute of Biopharmaceutical and Health Engineering, Tsinghua Shenzhen International Graduate School, Shenzhen 518055, China
 Download: PDF(1720 KB)   HTML
 Export: BibTeX | EndNote | Reference Manager | ProCite | RefWorks
Abstract

Enzyme–metal hybrid catalysts bridge the gap between enzymatic and heterogeneous catalysis, which is significant for expanding biocatalysis to a broader scope. Previous studies have demonstrated that the enzyme–metal hybrid catalysts exhibited considerably higher catalytic efficiency in cascade reactions, compared with that of the combination of separated enzyme and metal catalysts. However, the precise mechanism of this phenomenon remains unclear. Here, we investigated the diffusion process in enzyme–metal hybrid catalysts using Pd/lipase-Pluronic conjugates and the combination of immobilized lipase (Novozyme 435) and Pd/C as models. With reference to experimental data in previous studies, the Weisz–Prater parameter and efficiency factor of internal diffusion were calculated to evaluate the internal diffusion limitations in these catalysts. Thereafter, a kinetic model was developed and fitted to describe the proximity effect in hybrid catalysts. Results indicated that the enhanced catalytic efficiency of hybrid catalysts may arise from the decreased internal diffusion limitation, size effect of Pd clusters and proximity of the enzyme and metal active sites, which provides a theoretical foundation for the rational design of enzyme–metal hybrid catalysts.

Keywords enzyme–metal hybrid catalyst      internal diffusion      proximity effect      kinetic model     
Corresponding Author(s): Jun Ge   
Online First Date: 08 April 2022    Issue Date: 28 June 2022
 Cite this article:   
Shitong Cui,Jun Ge. Diffusion process in enzyme–metal hybrid catalysts[J]. Front. Chem. Sci. Eng., 2022, 16(6): 921-929.
 URL:  
https://academic.hep.com.cn/fcse/EN/10.1007/s11705-022-2144-4
https://academic.hep.com.cn/fcse/EN/Y2022/V16/I6/921
Fig.1  Schematics showing the process of (a) the heterogeneous catalysis and (b) the proximity channeling effect.
Symbol Description Unit
CWP Weisz–Prater parameter 1
η Efficiency factor of internal diffusion 1
φ Thiele modulus 1
De Effective diffusion coefficient cm2·s?1
D12 Molecular diffusion coefficient cm2·s?1
DK Knudsen diffusion coefficient cm2·s?1
ρc Particle density g·cm?1
R Particle size cm
θ Porosity of the catalysts 1
τ Tortuosity of the catalysts 1
re Average pore size cm
r(obs) Observed reaction rate mol·g?1·s?1
Cs Reactant concentration mol?cm?3
X Associating coefficient of the solvent 1
μ Viscosity of the solvent P
M Relative molecular weight of the solute g?mol?1
Vb Molar volume of the solute cm?3?mol?1
Tab.1  Parameters used in the model
Fig.2  Schematics showing (a) the principles and (b) kinetic models of the DKR reaction catalyzed by CALB and Pd clusters.
Catalyst CWP η
Pd/C (in tolune) 0.0098 0.9993
Pd/C (in water) 0.0168 0.9988
Novozyme 435 20.8400 0.3300
Tab.2  Weisz–Prater parameters (CWP) and effectiveness factors (η) of different catalysts
Fig.3  Radar maps illustrated the (a) effectiveness factor of internal diffusion η and (b) Weisz–Prater parameter CWP of Pd/C and Novozyme 435.
Fig.4  Verification of the reaction order of (a, b) Novozyme 435 and (c, d) Pd/CALB-P to the R-substrate when assuming (a, c) first order and (b, d) second order, respectively.
Fig.5  Numerical solutions of the DKR reaction model for Pd/C + Novozyme 435 (dashed line) and Pd/CALB-P (solid line) with different fractions of the proximity channeling effect.
Catalyst k1 k2 fc
Pd/C + Novozyme 435 0.13 0.60 0
Pd/CALB-P 0.37 13.60 1
Tab.3  Fitting values of kinetic parameters in the DKR reaction model
Fig.6  Fitting of the DKR reaction model to the experimental data reported for the Pd/C + Novozyme 435 and Pd/CALB-P.
1 J M Choi, S S Han, H S Kim. Industrial applications of enzyme biocatalysis: current status and future aspects. Biotechnology Advances, 2015, 33( 7): 1443– 1454
https://doi.org/10.1016/j.biotechadv.2015.02.014
2 B A Sandoval, T K Hyster. Emerging strategies for expanding the toolbox of enzymes in biocatalysis. Current Opinion in Chemical Biology, 2020, 55( 1): 45– 51
https://doi.org/10.1016/j.cbpa.2019.12.006
3 S Taguchi. Designer enzyme for green materials innovation: lactate-polymerizing enzyme as a key catalyst. Frontiers of Chemical Science and Engineering, 2017, 11( 1): 139– 142
https://doi.org/10.1007/s11705-017-1636-0
4 C Gao, F Lyu, Y Yin. Encapsulated metal nanoparticles for catalysis. Chemical Reviews, 2021, 121( 2): 834– 881
https://doi.org/10.1021/acs.chemrev.0c00237
5 L Jiao, H Yan, Y Wu, W Gu, C Zhu, D Du, Y Lin. When nanozymes meet single-atom catalysis. Angewandte Chemie International Edition, 2020, 59( 7): 2565– 2576
https://doi.org/10.1002/anie.201905645
6 D P Debecker, V Smeets, M Van der Verren, H M Arango, M Kinnaer, F Devred. Hybrid chemoenzymatic heterogeneous catalysts. Current Opinion in Green and Sustainable Chemistry, 2021, 28( 1): 100437
https://doi.org/10.1016/j.cogsc.2020.100437
7 C A Denard, J F Hartwig, H Zhao. Multistep one-pot reactions combining biocatalysts and chemical catalysts for asymmetric synthesis. ACS Catalysis, 2013, 3( 12): 2856– 2864
https://doi.org/10.1021/cs400633a
8 X Huang, M Cao, H Zhao. Integrating biocatalysis with chemocatalysis for selective transformations. Current Opinion in Chemical Biology, 2020, 55 : 161– 170
https://doi.org/10.1016/j.cbpa.2020.02.004
9 Y Cao, J Ge. Hybrid enzyme catalysts synthesized by a de novo approach for expanding biocatalysis. Chinese Journal of Catalysis, 2021, 42( 10): 1625– 1633
https://doi.org/10.1016/S1872-2067(21)63798-1
10 M Cortes-Clerget, N Akporji, J Zhou, F Gao, P Guo, M Parmentier, F Gallou, J Y Berthon, B H Lipshutz. Bridging the gap between transition metal- and bio-catalysis via aqueous micellar catalysis. Nature Communications, 2019, 10( 1): 2169
https://doi.org/10.1038/s41467-019-09751-4
11 X Li, X Cao, J Xiong, J Ge. Enzyme–metal hybrid catalysts for chemoenzymatic reactions. Small, 2020, 16( 15): 1902751
https://doi.org/10.1002/smll.201902751
12 R Ye, J Zhao, B B Wickemeyer, F D Toste, G A Somorjai. Foundations and strategies of the construction of hybrid catalysts for optimized performances. Nature Catalysis, 2018, 1( 5): 318– 325
https://doi.org/10.1038/s41929-018-0052-2
13 L K Thalen, D Zhao, J B Sortais, J Paetzold, C Hoben, J E Backvall. A chemoenzymatic approach to enantiomerically pure amines using dynamic kinetic resolution: application to the synthesis of norsertraline. Chemistry (Weinheim an der Bergstrasse, Germany), 2009, 15( 14): 3403– 3410
https://doi.org/10.1002/chem.200802303
14 M Filice, M Marciello, M del Puerto Morales, J M Palomo. Synthesis of heterogeneous enzyme–metal nanoparticle biohybrids in aqueous media and their applications in C–C bond formation and tandem catalysis. Chemical Communications, 2013, 49( 61): 6876– 6878
https://doi.org/10.1039/c3cc42475h
15 K P J Gustafson, T Gorbe, G de Gonzalo, N Yuan, C L Schreiber, A Shchukarev, C Tai, I Persson, X Zou, J E Backvall. Chemoenzymatic dynamic kinetic resolution of primary benzylic amines using Pd-0-CALB CLEA as a biohybrid catalyst. Chemistry (Weinheim an der Bergstrasse, Germany), 2019, 25( 39): 9174– 9179
https://doi.org/10.1002/chem.201901418
16 N Zhang, R Hubner, Y Wang, E Zhang, Y Zhou, S Dong, C Wu. Surface-functionalized mesoporous nanoparticles as heterogeneous supports to transfer bifunctional catalysts into organic solvents for tandem catalysis. ACS Applied Nano Materials, 2018, 1( 11): 6378– 6386
https://doi.org/10.1021/acsanm.8b01572
17 Y Wang, N Zhang, E Zhang, Y Han, Z Qi, M B Ansorge-Schumacher, Y Ge, C Wu. Heterogeneous metal-organic-framework-based biohybrid catalysts for cascade reactions in organic solvent. Chemistry (Weinheim an der Bergstrasse, Germany), 2019, 25( 7): 1716– 1721
https://doi.org/10.1002/chem.201805680
18 O Verho, J E Backvall. Chemoenzymatic dynamic kinetic resolution: a powerful tool for the preparation of enantiomerically pure alcohols and amines. Journal of the American Chemical Society, 2015, 137( 12): 3996– 4009
https://doi.org/10.1021/jacs.5b01031
19 X Li, Y Cao, K Luo, Y Sun, J Xiong, L Wang, Z Liu, J Li, J Ma, J Ge, H Xiao, R N Zare. Highly active enzyme–metal nanohybrids synthesized in protein–polymer conjugates. Nature Catalysis, 2019, 2( 8): 718– 725
https://doi.org/10.1038/s41929-019-0305-8
20 K Engstrom, E V Johnston, O Verho, K P J Gustafson, M Shakeri, C W Tai, J E Bäckvall. Co-immobilization of an enzyme and a metal into the compartments of mesoporous silica for cooperative tandem catalysis: an artificial metalloenzyme. Angewandte Chemie International Edition, 2013, 52( 52): 14006– 14010
https://doi.org/10.1002/anie.201306487
21 K P J Gustafson, R Lihammar, O Verho, K Engstrom, J E Backvall. Chemoenzymatic dynamic kinetic resolution of primary amines using a recyclable palladium nanoparticle catalyst together with lipases. Journal of Organic Chemistry, 2014, 79( 9): 3747– 3751
https://doi.org/10.1021/jo500508p
22 X Zhang, L Jing, F Chang, S Chen, H Yang, Q Yang. Positional immobilization of Pd nanoparticles and enzymes in hierarchical yolk-shell@shell nanoreactors for tandem catalysis. Chemical Communications, 2017, 53( 55): 7780– 7783
https://doi.org/10.1039/C7CC03177G
23 O Idan, H Hess. Diffusive transport phenomena in artificial enzyme cascades on scaffolds. Nature Nanotechnology, 2012, 7( 12): 769– 770
https://doi.org/10.1038/nnano.2012.222
24 O Idan, H Hess. Origins of activity enhancement in enzyme cascades on scaffolds. ACS Nano, 2013, 7( 10): 8658– 8665
https://doi.org/10.1021/nn402823k
25 S Tsitkov, T Pesenti, H Palacci, J Blanchet, H Hess. Queueing theory-based perspective of the kinetics of “channeled” enzyme cascade reactions. ACS Catalysis, 2018, 8( 11): 10721– 10731
https://doi.org/10.1021/acscatal.8b02760
26 Y Zhang, H Hess. Toward rational design of high-efficiency enzyme cascades. ACS Catalysis, 2017, 7( 9): 6018– 6027
https://doi.org/10.1021/acscatal.7b01766
27 Y Zhang, S Tsitkov, H Hess. Proximity does not contribute to activity enhancement in the glucose oxidase-horseradish peroxidase cascade. Nature Communications, 2016, 7( 1): 13982
https://doi.org/10.1038/ncomms13982
28 F Breveglieri, M Mazzotti. Role of racemization kinetics in the deracemization process via temperature cycles. Crystal Growth & Design, 2019, 19( 6): 3551– 3558
https://doi.org/10.1021/acs.cgd.9b00410
29 E Rahmani, M Rahmani. Catalytic process modeling and sensitivity analysis of alkylation of benzene with ethanol over MIL-101(Fe) and MIL-88(Fe). Frontiers of Chemical Science and Engineering, 2020, 14( 6): 1100– 1111
https://doi.org/10.1007/s11705-019-1891-3
30 Y Liu, J Qu, X Wu, K Zhang, Y Zhang. Reaction kinetics and internal diffusion of Zhundong char gasification with CO2. Frontiers of Chemical Science and Engineering, 2021, 15( 2): 373– 383
https://doi.org/10.1007/s11705-020-1949-2
31 G Li, C Zhang, X Xing. A kinetic model for analysis of physical tunnels in sequentially acting enzymes with direct proximity channeling. Biochemical Engineering Journal, 2016, 105( 1): 242– 248
https://doi.org/10.1016/j.bej.2015.09.020
32 Liang K. Industrialized study of Pd/C catalyst and its applying in catalytic transfer hydrogenation. Dissertation for the Doctoral Degree. Lanzhou: Lanzhou University, 2008
33 L Zhu. Study on deactivation and regeneration of Pd/C catalysts for PTA hydrofining. Dissertation for the Master Degree. Shanghai: East China University of Science and Technology, 2015, 20– 21
34 Y Yang. Preparation and characterization of Pd/C catalysts and their application in hydrogenation of dehydrodibenzylbiotin-methyl ester. Dissertation for the Master Degree. Hangzhou: Zhejiang University of Technology, 2013,
35 X Li. Construction and application of enzyme–metal hybrid catalysts with controllable metal nanoparticle size. Dissertation for the Doctoral Degree. Beijing: Tsinghua University, 2020,
36 L Bai, X Wang, Q Chen, Y Ye, H Zheng, J Guo, Y Yin, C Gao. Explaining the size dependence in platinum-nanoparticle-catalyzed hydrogenation reactions. Angewandte Chemie International Edition, 2016, 55( 50): 15656– 15661
https://doi.org/10.1002/anie.201609663
37 C Dong, C Lian, S Hu, Z Deng, J Gong, M Li, H Liu, M Xing, J Zhang. Size-dependent activity and selectivity of carbon dioxide photocatalytic reduction over platinum nanoparticles. Nature Communications, 2018, 9( 1): 1252
https://doi.org/10.1038/s41467-018-03666-2
[1] FCE-21078-OF-CS_suppl_1 Download
[1] Yun Liu, Jiangyuan Qu, Xuehui Wu, Kai Zhang, Yuan Zhang. Reaction kinetics and internal diffusion of Zhundong char gasification with CO2[J]. Front. Chem. Sci. Eng., 2021, 15(2): 373-383.
[2] Ehsan Rahmani, Mohammad Rahmani. Catalytic process modeling and sensitivity analysis of alkylation of benzene with ethanol over MIL-101(Fe) and MIL-88(Fe)[J]. Front. Chem. Sci. Eng., 2020, 14(6): 1100-1111.
[3] Renxing Wang,Zhenyu Liu,Leiming Ji,Xiaojin Guo,Xi Lin,Junfei Wu,Qingya Liu. Reaction kinetics of CaC2 formation from powder and compressed feeds[J]. Front. Chem. Sci. Eng., 2016, 10(4): 517-525.
[4] Mehdi SEDIGHI,Kamyar KEYVANLOO. Kinetic study of the methanol to olefin process on a SAPO-34 catalyst[J]. Front. Chem. Sci. Eng., 2014, 8(3): 306-311.
[5] Qingchuan CHEN, Yicun WEN, Yu CANG, Li LI, Xuhong GUO, Rui ZHANG. Selective removal of phenol by spherical particles of α-, β- and BoldItalic-cyclodextrin polymers: kinetics and isothermal equilibrium[J]. Front Chem Sci Eng, 2013, 7(2): 162-169.
[6] Haiding XIANG, Tiefeng WANG. Kinetic study of hydrodesulfurization of coker gas oil in a slurry reactor[J]. Front Chem Sci Eng, 2013, 7(2): 139-144.
[7] XU Ouguan, SU Hongye, JIN Xiaoming, CHU Jian. Kinetic model for hydroisomerization reaction of C-aromatics[J]. Front. Chem. Sci. Eng., 2008, 2(1): 10-16.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed