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Autophagy in cancer biology and therapy |
Noor GAMMOH,Simon WILKINSON( ) |
Edinburgh Cancer Research UK Centre, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Crewe Road South, United Kingdom, EH4 2XR |
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Abstract The role of macroautophagy (hereafter autophagy) in cancer biology and response to clinical intervention is complex. It is clear that autophagy is dysregulated in a wide variety of tumor settings, both during tumor initiation and progression, and in response to therapy. However, the pleiotropic mechanistic roles of autophagy in controlling cell behavior make it difficult to predict in a given tumor setting what the role of autophagy, and, by extension, the therapeutic outcome of targeting autophagy, might be. In this review we summarize the evidence in the literature supporting pro- and anti-tumorigenic and-therapeutic roles of autophagy in cancer. This overview encompasses roles of autophagy in nutrient management, cell death, cell senescence, regulation of proteotoxic stress and cellular homeostasis, regulation of tumor-host interactions and participation in changes in metabolism. We also try to understand, where possible, the mechanistic bases of these roles for autophagy. We specifically expand on the emerging role of genetically-engineered mouse models of cancer in shedding light on these issues in vivo. We also consider how any or all of the above functions of autophagy proteins might be targetable by extant or future classes of pharmacologic agents. We conclude by briefly exploring non-canonical roles for subsets of the key autophagy proteins in cellular processes, and how these might impact upon cancer.
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Keywords
autophagy
cancer
inflammation
metabolism
apoptosis
homeostasis
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Corresponding Author(s):
Simon WILKINSON
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Issue Date: 13 May 2014
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|
1 |
Barré B, Perkins N D (2010). The Skp2 promoter integrates signaling through the NF-κB, p53, and Akt/GSK3β pathways to regulate autophagy and apoptosis. Mol Cell, 38(4): 524–538
https://doi.org/10.1016/j.molcel.2010.03.018
pmid: 20513428
|
2 |
Behrends C, Sowa M E, Gygi S P, Harper J W (2010). Network organization of the human autophagy system. Nature, 466(7302): 68–76
https://doi.org/10.1038/nature09204
pmid: 20562859
|
3 |
Bellodi C, Lidonnici M R, Hamilton A, Helgason G V, Soliera A R, Ronchetti M, Galavotti S, Young K W, Selmi T, Yacobi R, Van Etten R A, Donato N, Hunter A, Dinsdale D, Tirrò E, Vigneri P, Nicotera P, Dyer M J, Holyoake T, Salomoni P, Calabretta B (2009). Targeting autophagy potentiates tyrosine kinase inhibitor-induced cell death in Philadelphia chromosome-positive cells, including primary CML stem cells. J Clin Invest, 119(5): 1109–1123
https://doi.org/10.1172/JCI35660
pmid: 19363292
|
4 |
Bensaad K, Cheung E C, Vousden K H (2009). Modulation of intracellular ROS levels by TIGAR controls autophagy. EMBO J, 28(19): 3015–3026
https://doi.org/10.1038/emboj.2009.242
pmid: 19713938
|
5 |
Bj?rk?y G, Lamark T, Brech A, Outzen H, Perander M, Overvatn A, Stenmark H, Johansen T (2005). p62/SQSTM1 forms protein aggregates degraded by autophagy and has a protective effect on huntingtin-induced cell death. J Cell Biol, 171(4): 603–614
https://doi.org/10.1083/jcb.200507002
pmid: 16286508
|
6 |
Boya P, González-Polo R A, Casares N, Perfettini J L, Dessen P, Larochette N, Métivier D, Meley D, Souquere S, Yoshimori T, Pierron G, Codogno P, Kroemer G (2005). Inhibition of macroautophagy triggers apoptosis. Mol Cell Biol, 25(3): 1025–1040
https://doi.org/10.1128/MCB.25.3.1025-1040.2005
pmid: 15657430
|
7 |
Capparelli C, Guido C, Whitaker-Menezes D, Bonuccelli G, Balliet R, Pestell T G, Goldberg A F, Pestell R G, Howell A, Sneddon S, Birbe R, Tsirigos A, Martinez-Outschoorn U, Sotgia F, Lisanti M P (2012). Autophagy and senescence in cancer-associated fibroblasts metabolically supports tumor growth and metastasis via glycolysis and ketone production. Cell Cycle, 11(12): 2285–2302
https://doi.org/10.4161/cc.20718
pmid: 22684298
|
8 |
Cesari R, Martin E S, Calin G A, Pentimalli F, Bichi R, McAdams H, Trapasso F, Drusco A, Shimizu M, Masciullo V, D’Andrilli G, Scambia G, Picchio M C, Alder H, Godwin A K, Croce C M (2003). Parkin, a gene implicated in autosomal recessive juvenile parkinsonism, is a candidate tumor suppressor gene on chromosome 6q25-q27. Proc Natl Acad Sci USA, 100(10): 5956–5961
https://doi.org/10.1073/pnas.0931262100
pmid: 12719539
|
9 |
Chang T K, Shravage B V, Hayes S D, Powers C M, Simin R T, Wade Harper J, Baehrecke E H (2013). Uba1 functions in Atg7- and Atg3-independent autophagy. Nat Cell Biol, 15(9): 1067–1078
https://doi.org/10.1038/ncb2804
pmid: 23873149
|
10 |
Cheong H, Lindsten T, Wu J, Lu C, Thompson C B (2011). Ammonia-induced autophagy is independent of ULK1/ULK2 kinases. Proc Natl Acad Sci USA, 108(27): 11121–11126
https://doi.org/10.1073/pnas.1107969108
pmid: 21690395
|
11 |
Cheong H, Wu J, Gonzales L K, Guttentag S H, Thompson C B, Lindsten T (2014). Analysis of a lung defect in autophagy-deficient mouse strains. Autophagy, 10(1): 45–56
https://doi.org/10.4161/auto.26505
pmid: 24275123
|
12 |
Ciechanover A (2005). Proteolysis: from the lysosome to ubiquitin and the proteasome. Nat Rev Mol Cell Biol, 6(1): 79–87
https://doi.org/10.1038/nrm1552
pmid: 15688069
|
13 |
Colleran A, Ryan A, O’Gorman A, Mureau C, Liptrot C, Dockery P, Fearnhead H, Egan L J (2011). Autophagosomal IkappaB alpha degradation plays a role in the long term control of tumor necrosis factor-alpha-induced nuclear factor-kappaB (NF-κB) activity. J Biol Chem, 286(26): 22886–22893
https://doi.org/10.1074/jbc.M110.199950
pmid: 21454695
|
14 |
Crighton D, Wilkinson S, O’Prey J, Syed N, Smith P, Harrison P R, Gasco M, Garrone O, Crook T, Ryan K M (2006). DRAM, a p53-induced modulator of autophagy, is critical for apoptosis. Cell, 126(1): 121–134
https://doi.org/10.1016/j.cell.2006.05.034
pmid: 16839881
|
15 |
Degenhardt K, Mathew R, Beaudoin B, Bray K, Anderson D, Chen G, Mukherjee C, Shi Y, Gélinas C, Fan Y, Nelson D A, Jin S, White E (2006). Autophagy promotes tumor cell survival and restricts necrosis, inflammation, and tumorigenesis. Cancer Cell, 10(1): 51–64
https://doi.org/10.1016/j.ccr.2006.06.001
pmid: 16843265
|
16 |
Deretic V, Saitoh T, Akira S (2013). Autophagy in infection, inflammation and immunity. Nat Rev Immunol, 13(10): 722–737
https://doi.org/10.1038/nri3532
pmid: 24064518
|
17 |
Di Bartolomeo S, Corazzari M, Nazio F, Oliverio S, Lisi G, Antonioli M, Pagliarini V, Matteoni S, Fuoco C, Giunta L, D’Amelio M, Nardacci R, Romagnoli A, Piacentini M, Cecconi F, Fimia G M (2010). The dynamic interaction of AMBRA1 with the dynein motor complex regulates mammalian autophagy. J Cell Biol, 191(1): 155–168
https://doi.org/10.1083/jcb.201002100
pmid: 20921139
|
18 |
Djavaheri-Mergny M, Amelotti M, Mathieu J, Besan?on F, Bauvy C, Souquère S, Pierron G, Codogno P (2006). NF-κB activation represses tumor necrosis factor-α-induced autophagy. J Biol Chem, 281(41): 30373–30382
https://doi.org/10.1074/jbc.M602097200
pmid: 16857678
|
19 |
D?rr J R, Yu Y, Milanovic M, Beuster G, Zasada C, D?britz J H, Lisec J, Lenze D, Gerhardt A, Schleicher K, Kratzat S, Purfürst B, Walenta S, Mueller-Klieser W, Gr?ler M, Hummel M, Keller U, Buck A K, D?rken B, Willmitzer L, Reimann M, Kempa S, Lee S, Schmitt C A (2013). Synthetic lethal metabolic targeting of cellular senescence in cancer therapy. Nature, 501(7467): 421–425
https://doi.org/10.1038/nature12437
pmid: 23945590
|
20 |
Dupont N, Jiang S, Pilli M, Ornatowski W, Bhattacharya D, Deretic V (2011). Autophagy-based unconventional secretory pathway for extracellular delivery of IL-1β. EMBO J, 30(23): 4701–4711
https://doi.org/10.1038/emboj.2011.398
pmid: 22068051
|
21 |
Duran A, Amanchy R, Linares J F, Joshi J, Abu-Baker S, Porollo A, Hansen M, Moscat J, Diaz-Meco M T (2011). p62 is a key regulator of nutrient sensing in the mTORC1 pathway. Mol Cell, 44(1): 134–146
https://doi.org/10.1016/j.molcel.2011.06.038
pmid: 21981924
|
22 |
Elgendy M, Sheridan C, Brumatti G, Martin S J (2011). Oncogenic Ras-induced expression of Noxa and Beclin-1 promotes autophagic cell death and limits clonogenic survival. Mol Cell, 42(1): 23–35
https://doi.org/10.1016/j.molcel.2011.02.009
pmid: 21353614
|
23 |
Fliss P M, Jowers T P, Brinkmann M M, Holstermann B, Mack C, Dickinson P, Hohenberg H, Ghazal P, Brune W (2012). Viral mediated redirection of NEMO/IKKγ to autophagosomes curtails the inflammatory cascade. PLoS Pathog, 8(2): e1002517
https://doi.org/10.1371/journal.ppat.1002517
pmid: 22319449
|
24 |
Gammoh N, Florey O, Overholtzer M, Jiang X (2013). Interaction between FIP200 and ATG16L1 distinguishes ULK1 complex-dependent and-independent autophagy. Nat Struct Mol Biol, 20(2): 144–149
https://doi.org/10.1038/nsmb.2475
pmid: 23262492
|
25 |
Ganley I G, Lam H, Wang J, Ding X, Chen S, Jiang X (2009). ULK1.ATG13.FIP200 complex mediates mTOR signaling and is essential for autophagy. J Biol Chem, 284(18): 12297–12305
https://doi.org/10.1074/jbc.M900573200
pmid: 19258318
|
26 |
Gao C, Cao W, Bao L, Zuo W, Xie G, Cai T, Fu W, Zhang J, Wu W, Zhang X, Chen Y G (2010a). Autophagy negatively regulates Wnt signalling by promoting Dishevelled degradation. Nat Cell Biol, 12(8): 781–790
https://doi.org/10.1038/ncb2082
pmid: 20639871
|
27 |
Gao Z, Gammoh N, Wong P M, Erdjument-Bromage H, Tempst P, Jiang X (2010b). Processing of autophagic protein LC3 by the 20S proteasome. Autophagy, 6(1): 126–137
https://doi.org/10.4161/auto.6.1.10928
pmid: 20061800
|
28 |
Garg A D, Dudek A M, Ferreira G B, Verfaillie T, Vandenabeele P, Krysko D V, Mathieu C, Agostinis P (2013). ROS-induced autophagy in cancer cells assists in evasion from determinants of immunogenic cell death. Autophagy, 9(9): 1292–1307
https://doi.org/10.4161/auto.25399
pmid: 23800749
|
29 |
Geng J, Klionsky D J (2008). The Atg8 and Atg12 ubiquitin-like conjugation systems in macroautophagy. ‘Protein modifications: beyond the usual suspects’ review series. EMBO Rep, 9(9): 859–864
https://doi.org/10.1038/embor.2008.163
pmid: 18704115
|
30 |
Goussetis D J, Gounaris E, Wu E J, Vakana E, Sharma B, Bogyo M, Altman J K, Platanias L C (2012). Autophagic degradation of the BCR-ABL oncoprotein and generation of antileukemic responses by arsenic trioxide. Blood, 120(17): 3555–3562
https://doi.org/10.1182/blood-2012-01-402578
pmid: 22898604
|
31 |
Grivennikov S I, Greten F R, Karin M (2010). Immunity, inflammation, and cancer. Cell, 140(6): 883–899
https://doi.org/10.1016/j.cell.2010.01.025
pmid: 20303878
|
32 |
Guo J Y, Chen H Y, Mathew R, Fan J, Strohecker A M, Karsli-Uzunbas G, Kamphorst J J, Chen G, Lemons J M, Karantza V, Coller H A, Dipaola R S, Gelinas C, Rabinowitz J D, White E (2011). Activated Ras requires autophagy to maintain oxidative metabolism and tumorigenesis. Genes Dev, 25(5): 460–470
https://doi.org/10.1101/gad.2016311
pmid: 21317241
|
33 |
Guo J Y, Karsli-Uzunbas G, Mathew R, Aisner S C, Kamphorst J J, Strohecker A M, Chen G, Price S, Lu W, Teng X, Snyder E, Santanam U, Dipaola R S, Jacks T, Rabinowitz J D, White E (2013). Autophagy suppresses progression of K-ras-induced lung tumors to oncocytomas and maintains lipid homeostasis. Genes Dev, 27(13): 1447–1461
https://doi.org/10.1101/gad.219642.113
pmid: 23824538
|
34 |
He C, Wei Y, Sun K, Li B, Dong X, Zou Z, Liu Y, Kinch L N, Khan S, Sinha S, Xavier R J, Grishin N V, Xiao G, Eskelinen E L, Scherer P E, Whistler J L, Levine B (2013). Beclin 2 functions in autophagy, degradation of G protein-coupled receptors, and metabolism. Cell, 154(5): 1085–1099
https://doi.org/10.1016/j.cell.2013.07.035
pmid: 23954414
|
35 |
Inami Y, Waguri S, Sakamoto A, Kouno T, Nakada K, Hino O, Watanabe S, Ando J, Iwadate M, Yamamoto M, Lee M S, Tanaka K, Komatsu M (2011). Persistent activation of Nrf2 through p62 in hepatocellular carcinoma cells. J Cell Biol, 193(2): 275–284
https://doi.org/10.1083/jcb.201102031
pmid: 21482715
|
36 |
Isakson P, Bj?r?s M, B?e S O, Simonsen A (2010). Autophagy contributes to therapy-induced degradation of the PML/RARA oncoprotein. Blood, 116(13): 2324–2331
https://doi.org/10.1182/blood-2010-01-261040
pmid: 20574048
|
37 |
Jia L, Gopinathan G, Sukumar J T, Gribben J G (2012). Blocking autophagy prevents bortezomib-induced NF-κB activation by reducing I-κBα degradation in lymphoma cells. PLoS ONE, 7(2): e32584
https://doi.org/10.1371/journal.pone.0032584
pmid: 22393418
|
38 |
Jin S M, Youle R J (2012). PINK1- and Parkin-mediated mitophagy at a glance. J Cell Sci, 125(Pt 4): 795–799
https://doi.org/10.1242/jcs.093849
pmid: 22448035
|
39 |
Johansen T, Lamark T (2011). Selective autophagy mediated by autophagic adapter proteins. Autophagy, 7(3): 279–296
https://doi.org/10.4161/auto.7.3.14487
pmid: 21189453
|
40 |
Jung C H, Jun C B, Ro S H, Kim Y M, Otto N M, Cao J, Kundu M, Kim D H (2009). ULK-Atg13-FIP200 complexes mediate mTOR signaling to the autophagy machinery. Mol Biol Cell, 20(7): 1992–2003
https://doi.org/10.1091/mbc.E08-12-1249
pmid: 19225151
|
41 |
Karantza-Wadsworth V, Patel S, Kravchuk O, Chen G, Mathew R, Jin S, White E (2007). Autophagy mitigates metabolic stress and genome damage in mammary tumorigenesis. Genes Dev, 21(13): 1621–1635
https://doi.org/10.1101/gad.1565707
pmid: 17606641
|
42 |
Kenzelmann Broz D, Spano Mello S, Bieging K T, Jiang D, Dusek R L, Brady C A, Sidow A, Attardi L D (2013). Global genomic profiling reveals an extensive p53-regulated autophagy program contributing to key p53 responses. Genes Dev, 27(9): 1016–1031
https://doi.org/10.1101/gad.212282.112
pmid: 23651856
|
43 |
Kim J, Kim Y C, Fang C, Russell R C, Kim J H, Fan W, Liu R, Zhong Q, Guan K L (2013a). Differential regulation of distinct Vps34 complexes by AMPK in nutrient stress and autophagy. Cell, 152(1–2): 290–303
https://doi.org/10.1016/j.cell.2012.12.016
pmid: 23332761
|
44 |
Kim J, Kundu M, Viollet B, Guan K L (2011a). AMPK and mTOR regulate autophagy through direct phosphorylation of Ulk1. Nat Cell Biol, 13(2): 132–141
https://doi.org/10.1038/ncb2152
pmid: 21258367
|
45 |
Kim K W, Paul P, Qiao J, Chung D H (2013b). Autophagy mediates paracrine regulation of vascular endothelial cells. Lab Invest, 93(6): 639–645
https://doi.org/10.1038/labinvest.2013.57
pmid: 23608754
|
46 |
Kim M J, Woo S J, Yoon C H, Lee J S, An S, Choi Y H, Hwang S G, Yoon G, Lee S J (2011b). Involvement of autophagy in oncogenic K-Ras-induced malignant cell transformation. J Biol Chem, 286(15): 12924–12932
https://doi.org/10.1074/jbc.M110.138958
pmid: 21300795
|
47 |
Komatsu M, Kurokawa H, Waguri S, Taguchi K, Kobayashi A, Ichimura Y, Sou Y S, Ueno I, Sakamoto A, Tong K I, Kim M, Nishito Y, Iemura S, Natsume T, Ueno T, Kominami E, Motohashi H, Tanaka K, Yamamoto M (2010). The selective autophagy substrate p62 activates the stress responsive transcription factor Nrf2 through inactivation of Keap1. Nat Cell Biol, 12(3): 213–223
pmid: 20173742
|
48 |
Komatsu M, Waguri S, Ueno T, Iwata J, Murata S, Tanida I, Ezaki J, Mizushima N, Ohsumi Y, Uchiyama Y, Kominami E, Tanaka K, Chiba T (2005). Impairment of starvation-induced and constitutive autophagy in Atg7-deficient mice. J Cell Biol, 169(3): 425–434
https://doi.org/10.1083/jcb.200412022
pmid: 15866887
|
49 |
Kon M, Kiffin R, Koga H, Chapochnick J, Macian F, Varticovski L, Cuervo A M (2011). Chaperone-mediated autophagy is required for tumor growth. Sci Transl Med, 3: 109ra117
|
50 |
Kraft C, Peter M, Hofmann K (2010). Selective autophagy: ubiquitin-mediated recognition and beyond. Nat Cell Biol, 12(9): 836–841
https://doi.org/10.1038/ncb0910-836
pmid: 20811356
|
51 |
Kuballa P, Nolte W M, Castoreno A B, Xavier R J (2012). Autophagy and the immune system. Annu Rev Immunol, 30(1): 611–646
https://doi.org/10.1146/annurev-immunol-020711-074948
pmid: 22449030
|
52 |
Kuo T C, Chen C T, Baron D, Onder T T, Loewer S, Almeida S, Weismann C M, Xu P, Houghton J M, Gao F B, Daley G Q, Doxsey S (2011). Midbody accumulation through evasion of autophagy contributes to cellular reprogramming and tumorigenicity. Nat Cell Biol, 13(10): 1214–1223
https://doi.org/10.1038/ncb2332
pmid: 21909099
|
53 |
Lau A, Zheng Y, Tao S, Wang H, Whitman S A, White E, Zhang D D (2013). Arsenic inhibits autophagic flux, activating the Nrf2-Keap1 pathway in a p62-dependent manner. Mol Cell Biol, 33(12): 2436–2446
https://doi.org/10.1128/MCB.01748-12
pmid: 23589329
|
54 |
Lee E J, Tournier C (2011). The requirement of uncoordinated 51-like kinase 1 (ULK1) and ULK2 in the regulation of autophagy. Autophagy, 7(7): 689–695
https://doi.org/10.4161/auto.7.7.15450
pmid: 21460635
|
55 |
Lee I H, Kawai Y, Fergusson M M, Rovira I I, Bishop A J, Motoyama N, Cao L, Finkel T (2012). Atg7 modulates p53 activity to regulate cell cycle and survival during metabolic stress. Science, 336(6078): 225–228
https://doi.org/10.1126/science.1218395
pmid: 22499945
|
56 |
Lee S J, Kim H P, Jin Y, Choi A M, Ryter S W (2011). Beclin 1 deficiency is associated with increased hypoxia-induced angiogenesis. Autophagy, 7(8): 829–839
https://doi.org/10.4161/auto.7.8.15598
pmid: 21685724
|
57 |
Levine B, Mizushima N, Virgin H W (2011). Autophagy in immunity and inflammation. Nature, 469(7330): 323–335
https://doi.org/10.1038/nature09782
pmid: 21248839
|
58 |
Liu H, He Z, von Rutte T, Yousefi S, Hunger R E, Simon H U (2013). Down-Regulation of Autophagy-Related Protein 5 (ATG5) Contributes to the Pathogenesis of Early-Stage Cutaneous Melanoma. Sci Transl Med, 5: 202ra123
|
59 |
Lock R, Roy S, Kenific C M, Su J S, Salas E, Ronen S M, Debnath J (2011). Autophagy facilitates glycolysis during Ras-mediated oncogenic transformation. Mol Biol Cell, 22(2): 165–178
https://doi.org/10.1091/mbc.E10-06-0500
pmid: 21119005
|
60 |
Lu Z, Luo R Z, Lu Y, Zhang X, Yu Q, Khare S, Kondo S, Kondo Y, Yu Y, Mills G B, Liao W S, Bast R C Jr (2008). The tumor suppressor gene ARHI regulates autophagy and tumor dormancy in human ovarian cancer cells. J Clin Invest, 118(12): 3917–3929
pmid: 19033662
|
61 |
Lum J J, Bauer D E, Kong M, Harris M H, Li C, Lindsten T, Thompson C B (2005). Growth factor regulation of autophagy and cell survival in the absence of apoptosis. Cell, 120(2): 237–248
https://doi.org/10.1016/j.cell.2004.11.046
pmid: 15680329
|
62 |
Maes H, Rubio N, Garg A D, Agostinis P (2013). Autophagy: shaping the tumor microenvironment and therapeutic response. Trends Mol Med, 19(7): 428–446
https://doi.org/10.1016/j.molmed.2013.04.005
pmid: 23714574
|
63 |
Maskey D, Yousefi S, Schmid I, Zlobec I, Perren A, Friis R, Simon H U (2013). ATG5 is induced by DNA-damaging agents and promotes mitotic catastrophe independent of autophagy. Nature Commun, 4: 2130
|
64 |
Mathew R, Karp C M, Beaudoin B, Vuong N, Chen G, Chen H Y, Bray K, Reddy A, Bhanot G, Gelinas C, Dipaola R S, Karantza-Wadsworth V, White E (2009). Autophagy suppresses tumorigenesis through elimination of p62. Cell, 137(6): 1062–1075
https://doi.org/10.1016/j.cell.2009.03.048
pmid: 19524509
|
65 |
Mathew R, Kongara S, Beaudoin B, Karp C M, Bray K, Degenhardt K, Chen G, Jin S, White E (2007). Autophagy suppresses tumor progression by limiting chromosomal instability. Genes Dev, 21(11): 1367–1381
https://doi.org/10.1101/gad.1545107
pmid: 17510285
|
66 |
Maycotte P, Aryal S, Cummings C T, Thorburn J, Morgan M J, Thorburn A (2012). Chloroquine sensitizes breast cancer cells to chemotherapy independent of autophagy. Autophagy, 8(2): 200–212
https://doi.org/10.4161/auto.8.2.18554
pmid: 22252008
|
67 |
Michaud M, Martins I, Sukkurwala A Q, Adjemian S, Ma Y, Pellegatti P, Shen S, Kepp O, Scoazec M, Mignot G, Rello-Varona S, Tailler M, Menger L, Vacchelli E, Galluzzi L, Ghiringhelli F, di Virgilio F, Zitvogel L, Kroemer G (2011). Autophagy-dependent anticancer immune responses induced by chemotherapeutic agents in mice. Science, 334(6062): 1573–1577
https://doi.org/10.1126/science.1208347
pmid: 22174255
|
68 |
Mizushima N, Komatsu M (2011). Autophagy: renovation of cells and tissues. Cell, 147(4): 728–741
https://doi.org/10.1016/j.cell.2011.10.026
pmid: 22078875
|
69 |
Mizushima N, Yamamoto A, Hatano M, Kobayashi Y, Kabeya Y, Suzuki K, Tokuhisa T, Ohsumi Y, Yoshimori T (2001). Dissection of autophagosome formation using Apg5-deficient mouse embryonic stem cells. J Cell Biol, 152(4): 657–668
https://doi.org/10.1083/jcb.152.4.657
pmid: 11266458
|
70 |
Mortensen M, Soilleux E J, Djordjevic G, Tripp R, Lutteropp M, Sadighi-Akha E, Stranks A J, Glanville J, Knight S, Jacobsen S E, Kranc K R, Simon A K (2011). The autophagy protein Atg7 is essential for hematopoietic stem cell maintenance. J Exp Med, 208(3): 455–467
https://doi.org/10.1084/jem.20101145
pmid: 21339326
|
71 |
Musiwaro P, Smith M, Manifava M, Walker S A, Ktistakis N T (2013). Characteristics and requirements of basal autophagy in HEK 293 cells. Autophagy, 9(9): 1407–1417
https://doi.org/10.4161/auto.25455
pmid: 23800949
|
72 |
Narita M, Young A R, Arakawa S, Samarajiwa S A, Nakashima T, Yoshida S, Hong S, Berry L S, Reichelt S, Ferreira M, Tavaré S, Inoki K, Shimizu S, Narita M (2011). Spatial coupling of mTOR and autophagy augments secretory phenotypes. Science, 332(6032): 966–970
https://doi.org/10.1126/science.1205407
pmid: 21512002
|
73 |
Newman A C, Scholefield C L, Kemp A J, Newman M, McIver E G, Kamal A, Wilkinson S (2012). TBK1 kinase addiction in lung cancer cells is mediated via autophagy of Tax1bp1/Ndp52 and non-canonical NF-κB signalling. PLoS ONE, 7(11): e50672
https://doi.org/10.1371/journal.pone.0050672
pmid: PMID: 23209807
|
74 |
Noman M Z, Janji B, Kaminska B, Van Moer K, Pierson S, Przanowski P, Buart S, Berchem G, Romero P, Mami-Chouaib F, Chouaib S (2011). Blocking hypoxia-induced autophagy in tumors restores cytotoxic T-cell activity and promotes regression. Cancer Res, 71(18): 5976–5986
https://doi.org/10.1158/0008-5472.CAN-11-1094
pmid: 21810913
|
75 |
Paul S, Kashyap A K, Jia W, He Y W, Schaefer B C (2012). Selective autophagy of the adaptor protein Bcl10 modulates T cell receptor activation of NF-κB. Immunity, 36(6): 947–958
https://doi.org/10.1016/j.immuni.2012.04.008
pmid: 22658522
|
76 |
Penna F, Costamagna D, Pin F, Camperi A, Fanzani A, Chiarpotto E M, Cavallini G, Bonelli G, Baccino F M, Costelli P (2013). Autophagic degradation contributes to muscle wasting in cancer cachexia. Am J Pathol, 182(4): 1367–1378
https://doi.org/10.1016/j.ajpath.2012.12.023
pmid: 23395093
|
77 |
Petherick K J, Williams A C, Lane J D, Ordó?ez-Morán P, Huelsken J, Collard T J, Smartt H J, Batson J, Malik K, Paraskeva C, Greenhough A (2013). Autolysosomal β-catenin degradation regulates Wnt-autophagy-p62 crosstalk. EMBO J, 32(13): 1903–1916
https://doi.org/10.1038/emboj.2013.123
pmid: 23736261
|
78 |
Pohl C, Jentsch S (2009). Midbody ring disposal by autophagy is a post-abscission event of cytokinesis. Nat Cell Biol, 11(1): 65–70
https://doi.org/10.1038/ncb1813
pmid: 19079246
|
79 |
Qu X, Yu J, Bhagat G, Furuya N, Hibshoosh H, Troxel A, Rosen J, Eskelinen E L, Mizushima N, Ohsumi Y, Cattoretti G, Levine B (2003). Promotion of tumorigenesis by heterozygous disruption of the beclin 1 autophagy gene. J Clin Invest, 112(12): 1809–1820
pmid: 14638851
|
80 |
Radoshevich L, Murrow L, Chen N, Fernandez E, Roy S, Fung C, Debnath J (2010). ATG12 conjugation to ATG3 regulates mitochondrial homeostasis and cell death. Cell, 142(4): 590–600
https://doi.org/10.1016/j.cell.2010.07.018
pmid: 20723759
|
81 |
Reggiori F, Komatsu M, Finley K, Simonsen A (2012). Autophagy: more than a nonselective pathway. Int J Cell Biol, 2012: 219625
https://doi.org/10.1155/2012/219625
pmid: 22666256
|
82 |
Rosenfeldt M T, O’Prey J, Morton J P, Nixon C, MacKay G, Mrowinska A, Au A, Rai T S, Zheng L, Ridgway R, Adams P D, Anderson K I, Gottlieb E, Sansom O J, Ryan K M (2013). p53 status determines the role of autophagy in pancreatic tumour development. Nature, 504(7479): 296–300
https://doi.org/10.1038/nature12865
pmid: 24305049
|
83 |
Rubinstein A D, Eisenstein M, Ber Y, Bialik S, Kimchi A (2011). The autophagy protein Atg12 associates with antiapoptotic Bcl-2 family members to promote mitochondrial apoptosis. Mol Cell, 44(5): 698–709
https://doi.org/10.1016/j.molcel.2011.10.014
pmid: 22152474
|
84 |
Rubinsztein D C, Shpilka T, Elazar Z (2012). Mechanisms of autophagosome biogenesis. Curr Biol, 22(1): R29–R34
https://doi.org/10.1016/j.cub.2011.11.034
pmid: 22240478
|
85 |
Russell R C, Tian Y, Yuan H, Park H W, Chang Y Y, Kim J, Kim H, Neufeld T P, Dillin A, Guan K L (2013). ULK1 induces autophagy by phosphorylating Beclin-1 and activating VPS34 lipid kinase. Nat Cell Biol, 15(7): 741–750
https://doi.org/10.1038/ncb2757
pmid: 23685627
|
86 |
Saitoh T, Fujita N, Jang M H, Uematsu S, Yang B G, Satoh T, Omori H, Noda T, Yamamoto N, Komatsu M, Tanaka K, Kawai T, Tsujimura T, Takeuchi O, Yoshimori T, Akira S (2008). Loss of the autophagy protein Atg16L1 enhances endotoxin-induced IL-1beta production. Nature, 456(7219): 264–268
https://doi.org/10.1038/nature07383
pmid: 18849965
|
87 |
Sandilands E, Serrels B, McEwan D G, Morton J P, Macagno J P, McLeod K, Stevens C, Brunton V G, Langdon W Y, Vidal M, Sansom O J, Dikic I, Wilkinson S, Frame M C (2012a). Autophagic targeting of Src promotes cancer cell survival following reduced FAK signalling. Nat Cell Biol, 14(1): 51–60
https://doi.org/10.1038/ncb2386
pmid: 22138575
|
88 |
Sandilands E, Serrels B, Wilkinson S, Frame M C (2012b). Src-dependent autophagic degradation of Ret in FAK-signalling-defective cancer cells. EMBO Rep, 13(8): 733–740
https://doi.org/10.1038/embor.2012.92
pmid: 22732841
|
89 |
Shang L, Wang X (2011). AMPK and mTOR coordinate the regulation of Ulk1 and mammalian autophagy initiation. Autophagy, 7(8): 924–926
https://doi.org/10.4161/auto.7.8.15860
pmid: 21521945
|
90 |
Sheen J H, Zoncu R, Kim D, Sabatini D M (2011). Defective regulation of autophagy upon leucine deprivation reveals a targetable liability of human melanoma cells in vitro and in vivo. Cancer Cell, 19(5): 613–628
https://doi.org/10.1016/j.ccr.2011.03.012
pmid: 21575862
|
91 |
Shibata T, Ohta T, Tong K I, Kokubu A, Odogawa R, Tsuta K, Asamura H, Yamamoto M, Hirohashi S (2008). Cancer related mutations in NRF2 impair its recognition by Keap1-Cul3 E3 ligase and promote malignancy. Proc Natl Acad Sci USA, 105(36): 13568–13573
https://doi.org/10.1073/pnas.0806268105
pmid: 18757741
|
92 |
Shimizu S, Kanaseki T, Mizushima N, Mizuta T, Arakawa-Kobayashi S, Thompson C B, Tsujimoto Y (2004). Role of Bcl-2 family proteins in a non-apoptotic programmed cell death dependent on autophagy genes. Nat Cell Biol, 6(12): 1221–1228
https://doi.org/10.1038/ncb1192
pmid: 15558033
|
93 |
Shoji-Kawata S, Sumpter R, Leveno M, Campbell G R, Zou Z, Kinch L, Wilkins A D, Sun Q, Pallauf K, MacDuff D, Huerta C, Virgin H W, Helms J B, Eerland R, Tooze S A, Xavier R, Lenschow D J, Yamamoto A, King D, Lichtarge O, Grishin N V, Spector S A, Kaloyanova D V, Levine B (2013). Identification of a candidate therapeutic autophagy-inducing peptide. Nature, 494(7436): 201–206
https://doi.org/10.1038/nature11866
pmid: 23364696
|
94 |
Stingele S, Stoehr G, Peplowska K, Cox J, Mann M, Storchova Z (2012). Global analysis of genome, transcriptome and proteome reveals the response to aneuploidy in human cells. Mol Syst Biol, 8: 608
https://doi.org/10.1038/msb.2012.40
pmid: 22968442
|
95 |
Strohecker A M, Guo J Y, Karsli-Uzunbas G, Price S M, Chen G J, Mathew R, McMahon M, White E (2013). Autophagy sustains mitochondrial glutamine metabolism and growth of BRAFV600E-driven lung tumors. Cancer Discov. doi: 10.1158/2159-8290.CD-13-0397
|
96 |
Sui X, Chen R, Wang Z, Huang Z, Kong N, Zhang M, Han W, Lou F, Yang J, Zhang Q, Wang X, He C, Pan H (2013). Autophagy and chemotherapy resistance: a promising therapeutic target for cancer treatment. Cell Death Dis, 4(10): e838
https://doi.org/10.1038/cddis.2013.350
pmid: 24113172
|
97 |
Takamura A, Komatsu M, Hara T, Sakamoto A, Kishi C, Waguri S, Eishi Y, Hino O, Tanaka K, Mizushima N (2011). Autophagy-deficient mice develop multiple liver tumors. Genes Dev, 25(8): 795–800
https://doi.org/10.1101/gad.2016211
pmid: 21498569
|
98 |
Tang Y C, Williams B R, Siegel J J, Amon A (2011). Identification of aneuploidy-selective antiproliferation compounds. Cell, 144(4): 499–512
https://doi.org/10.1016/j.cell.2011.01.017
pmid: 21315436
|
99 |
Wang R C, Wei Y, An Z, Zou Z, Xiao G, Bhagat G, White M, Reichelt J, Levine B (2012a). Akt-mediated regulation of autophagy and tumorigenesis through Beclin 1 phosphorylation. Science, 338(6109): 956–959
https://doi.org/10.1126/science.1225967
pmid: 23112296
|
100 |
Wang Y, Wang X D, Lapi E, Sullivan A, Jia W, He Y W, Ratnayaka I, Zhong S, Goldin R D, Goemans C G, Tolkovsky A M, Lu X (2012b). Autophagic activity dictates the cellular response to oncogenic RAS. Proc Natl Acad Sci USA, 109(33): 13325–13330
https://doi.org/10.1073/pnas.1120193109
pmid: 22847423
|
101 |
Wei H, Wei S, Gan B, Peng X, Zou W, Guan J L (2011). Suppression of autophagy by FIP200 deletion inhibits mammary tumorigenesis. Genes Dev, 25(14): 1510–1527
https://doi.org/10.1101/gad.2051011
pmid: 21764854
|
102 |
Wei Y, Zou Z, Becker N, Anderson M, Sumpter R, Xiao G, Kinch L, Koduru P, Christudass C S, Veltri R W, Grishin N V, Peyton M, Minna J, Bhagat G, Levine B (2013). EGFR-mediated Beclin 1 phosphorylation in autophagy suppression, tumor progression, and tumor chemoresistance. Cell, 154(6): 1269–1284
https://doi.org/10.1016/j.cell.2013.08.015
pmid: 24034250
|
103 |
Weidberg H, Shpilka T, Shvets E, Abada A, Shimron F, Elazar Z (2011). LC3 and GATE-16 N termini mediate membrane fusion processes required for autophagosome biogenesis. Dev Cell, 20(4): 444–454
https://doi.org/10.1016/j.devcel.2011.02.006
pmid: 21497758
|
104 |
Wild P, Farhan H, McEwan D G, Wagner S, Rogov V V, Brady N R, Richter B, Korac J, Waidmann O, Choudhary C, D?tsch V, Bumann D, Dikic I (2011). Phosphorylation of the autophagy receptor optineurin restricts Salmonella growth. Science, 333(6039): 228–233
https://doi.org/10.1126/science.1205405
pmid: 21617041
|
105 |
Wilkinson S, O’Prey J, Fricker M, Ryan K M (2009). Hypoxia-selective macroautophagy and cell survival signaled by autocrine PDGFR activity. Genes Dev, 23(11): 1283–1288
https://doi.org/10.1101/gad.521709
pmid: 19487569
|
106 |
Wirawan E, Vanden Berghe T, Lippens S, Agostinis P, Vandenabeele P (2012). Autophagy: for better or for worse. Cell Res, 22(1): 43–61
https://doi.org/10.1038/cr.2011.152
pmid: 21912435
|
107 |
Wong P M, Puente C, Ganley I G, Jiang X (2013). The ULK1 complex: sensing nutrient signals for autophagy activation. Autophagy, 9(2): 124–137
https://doi.org/10.4161/auto.23323
pmid: 23295650
|
108 |
Xie Z, Klionsky D J (2007). Autophagosome formation: core machinery and adaptations. Nat Cell Biol, 9(10): 1102–1109
https://doi.org/10.1038/ncb1007-1102
pmid: 17909521
|
109 |
Yang S, Wang X, Contino G, Liesa M, Sahin E, Ying H, Bause A, Li Y, Stommel J M, Dell’antonio G, Mautner J, Tonon G, Haigis M, Shirihai O S, Doglioni C, Bardeesy N, Kimmelman A C (2011). Pancreatic cancers require autophagy for tumor growth. Genes Dev, 25(7): 717–729
https://doi.org/10.1101/gad.2016111
pmid: 21406549
|
110 |
Yee K S, Wilkinson S, James J, Ryan K M, Vousden K H (2009). PUMA- and Bax-induced autophagy contributes to apoptosis. Cell Death Differ, 16(8): 1135–1145
https://doi.org/10.1038/cdd.2009.28
pmid: 19300452
|
111 |
Young A R, Narita M, Ferreira M, Kirschner K, Sadaie M, Darot J F, Tavaré S, Arakawa S, Shimizu S, Watt F M, Narita M (2009). Autophagy mediates the mitotic senescence transition. Genes Dev, 23(7): 798–803
https://doi.org/10.1101/gad.519709
pmid: 19279323
|
112 |
Yousefi S, Perozzo R, Schmid I, Ziemiecki A, Schaffner T, Scapozza L, Brunner T, Simon H U (2006). Calpain-mediated cleavage of Atg5 switches autophagy to apoptosis. Nat Cell Biol, 8(10): 1124–1132
https://doi.org/10.1038/ncb1482
pmid: 16998475
|
113 |
Yu L, Alva A, Su H, Dutt P, Freundt E, Welsh S, Baehrecke E H, Lenardo M J (2004). Regulation of an ATG7-beclin 1 program of autophagic cell death by caspase-8. Science, 304(5676): 1500–1502
https://doi.org/10.1126/science.1096645
pmid: 15131264
|
114 |
Yu L, Wan F, Dutta S, Welsh S, Liu Z, Freundt E, Baehrecke E H, Lenardo M (2006). Autophagic programmed cell death by selective catalase degradation. Proc Natl Acad Sci USA, 103(13): 4952–4957
https://doi.org/10.1073/pnas.0511288103
pmid: 16547133
|
115 |
Yue Z, Jin S, Yang C, Levine A J, Heintz N (2003). Beclin 1, an autophagy gene essential for early embryonic development, is a haploinsufficient tumor suppressor. Proc Natl Acad Sci USA, 100(25): 15077–15082
https://doi.org/10.1073/pnas.2436255100
pmid: 14657337
|
116 |
Zhao Y, Yang J, Liao W, Liu X, Zhang H, Wang S, Wang D, Feng J, Yu L, Zhu W G (2010). Cytosolic FoxO1 is essential for the induction of autophagy and tumour suppressor activity. Nat Cell Biol, 12(7): 665–675
https://doi.org/10.1038/ncb2069
pmid: 20543840
|
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